Enzalutamide-resistant related lncRNA NONHSAT210528 promotes the proliferation and invasion of prostate cancer
Introduction
Prostate cancer (PCa) is the second most common cancer in the world, and is also a leading cause of cancer-related death in men (1,2). In recent years, the incidence rate of PCa has increased significantly in China, and the proportion of patients with advanced PCa in China is much higher than that in European and American countries (3). Androgen deprivation is the main treatment for patients with advanced PCa. As a new-generation androgen-receptor antagonist, enzalutamide effectively prolongs the overall survival of patients, and is a first-choice drug for metastatic castration resistant PCa (mCRPC) patients (4). However, 20–40% of patients with mCRPC patients demonstrate de novo resistance to enzalutamide, and most patients will acquire drug resistance after 1–2 years of treatment sensitivity (5-7). After secondary resistance, the disease develops rapidly and maliciously, and patient prognosis is poor (5-7). Thus, enzalutamide-resisant molecular regulatory mechanism needs to be studied urgently, and the corresponding early warning markers and intervention targets identified.
Long non-coding RNA (lncRNA) is a class of non-coding RNA molecules with a length >200 nt (8-10). LncRNA regulates cell function through many levels and mechanisms, including chromatin modification, transcriptional regulation, and microRNA function regulation, and it also plays an important role in the biological behavior of tumors (11,12). For example, lncRNA SChLAP1 enhances the ability of invasion and metastasis of PCa by inhibiting the function of the SWItch/Sucrose Non-Fermentable complex (13). ROR1-HER3 and the Hippo-YAP pathway depend on lncRNA MAYAY mediated crosstalk activation to induce osteoclast differentiation and promote bone metastasis in breast cancer (14). LncRNA TTTY15 from the Y chromosome upregulates the expression of cell division protein kinase 6 and fibronectin-1 through the sponge adsorption of miRNA-let-7, which promotes the progression of PCa (15). However, there are few reports about the role of lncRNA in disease progression after enzalutamide resistance in PCa.
In this study, we found that enzalutamide resistance induced by lncRNA NONHSAT210528 promoted the expression of YOD1 through the mechanism of competitive endogenous RNA (ceRNA) by regulating the expression of miR-21-5p in PCa cells after resistance to enzalutamide. Overall, lncRNA NONHSAT210528 directly enhanced the malignant characteristics of PCa cells. We present the following article in accordance with the ARRIVE reporting checklist (available at https://tau.amegroups.com/article/view/10.21037/tau-22-99/rc).
Methods
LncRNA expression analysis
The total RNA of the samples was quantified by NanoDrop ND-2000 (Thermo Scientific, USA), and RNA integrity was detected by Agilent Bioalyzer 2100 (Agile technologies, USA). After the RNA quality inspection was qualified, the sample marking, chip hybridization and elution refer to the standard flow of chip. First, the total RNA was reverse transcribed into double-stranded complementary DNA (cDNA), and the cDNA labeled with cyanine-3-CTP (Cy3) was then synthesized. The labeled cDNA was hybridized with microarray, and the original image was obtained using the Agilent scanner G2505C (Agilent Technologies) after elution. The original data were extracted using Feature Extraction software (Version 10.7.1.1, Agilent Technologies). Next, quantitative standardization and the subsequent processing were carried out using geneprinting software (version 13.1, Agilent technologies). The standardized data were filtered, and at least 1 group of 100% labeled “P” probes in each group of samples were left for the subsequent comparative analysis. Differential genes and differential lncRNAs were screened by the P value and the fold-change value of the t-test. The screening criteria were an upregulated or downregulated fold-change value ≥2.0 and P value ≤0.05.
Cell culture, lncRNA NONHSAT210528 overexpression and knockdown
Human PCa cell lines (C4-2, C4-2b) were purchased from American Type Culture Collection (ATCC). All PCa cells were cultured in RPMI 1640 medium supplemented with 10% Fetal bovine serum at 37 ℃ in 5% CO2. Enzalutamide-resistant C4-2 cell (C4-2 ENZ-R) was established by being exposed to increasing concentrations of enzalutamide according to previous study (16). For NONHSAT210528 overexpression, we cloned NONHSAT210528 into pLVX-vector by gene synthesis and NONHSAT210528 overexpression vector (pLVX-NONHSAT210528) was transferred into cells. The siRNA target sequences (5'-ACCCACTATAATGTATCATTAGT-3') were used for knockdown NONHSAT210528, and were cloned into pLKO.1-Vector.
Real-time PCR analysis
Total RNA was extracted from the cells and tissue by Trizol reagent, and the concentration of RNA was detected by NanoDrop. One microgram of extracted RNA was reverse transcribed using an RNA reverse transcription kit. A real-time fluorescent quantitative polymerase chain reaction (PCR) was performed using the SYBR Green Real-Time Quantitative PCR Master Mix kit, and the sample was added according to the instructions of the kit. The reaction conditions were as follows: Procedure 1: 95 ℃, 30 s, 1 cycle; Program 2: 95 ℃, 5 s, 50 cycles, 60 ℃, 34 s; Program 3: 95 ℃, 5 s, 1 cycle, 65 ℃, 60 s, 97 ℃, 1 s, and Program 4: 42 ℃, 30 s, 1 cycle. The relative gene expression was calculated by the 2−△△CT method, and the messenger RNA (mRNA) expression was corrected by glyceraldehyde 3-phosphate dehydrogenase expression, and the lncRNA expression was corrected by GAPDH expression.
CCK-8 and colony formation assays
The cells were seeded into a 96-well culture plate with a density of 4,000 cells/well. The activity of cells was detected using Cell Counting Kit-8 (CCK-8) at 24 h, 36 h, 48 h, and 96 h after inoculation with 10 µL of CCK-8 in a 37 ℃ incubator for 2 h. The absorbance at 450 nm was detected by an enzyme reader. For the colony formation assay, cells were plated in 6-well plates (1,500 cells/well). After incubation for seven days, the cells were fixed with paraformaldehyde and stained with crystal violet stain.
RNA pull down
The MS2bs sequence was coupled to the lncRNA NONHSAT210528 sequence, lncRNA NONHSAT210528 overexpression vector coupled with MS2Bs sequence was transfected into cells. The cells were lysed and incubated with MS2 protein labeled by magnetic beads with cell lysate, and then the pull down product was detected by qPCR. Biotin labeled miRNA was incubated with cell lysate to form RNA-RNA complex. The complex can be combined with streptavidin labeled magnetic beads to separate from other components in the incubation solution. The complex was eluted and detected by qPCR.
Transwell and wound scratch assay
After 1:1 mixing of Dulbecco’s Modified Eagle Medium and matrigel, 50 µL of the liquid was evenly spread in the Transwell upper chamber and placed in a 37 ℃ incubator for 45 min. The cells were seeded into the Transwell upper chamber at a density of 20,000 cells/well; the Transwell upper chamber contained serum-free medium, while 700 µL of a medium containing 5% serum was added to the lower chamber. The cells at the bottom of the Transwell chambers were stained with crystal violet and counted after photographs had been taken. To perform the wound scratch assay, cells were seeded on 6-well plates and transfected for 48 h, followed by the creation of an artificial, homogenous scratch wound on a confluent monolayer culture of cells with a pipette tip. The cells were imaged at 2 different time points (0 and 24 h).
Western blot analysis
After the culture supernatant was sucked off, it was washed once with phosphate buffer, and 100 µL of RIPA lysate containing 1 mmol/L of PMSF was added to each hole. The cells were scraped off on ice with a cell scraper, lysed on ice for 30 min, centrifuged at 12,000 r/min for 15 min at 4 ℃, and the protein lysate supernatant was then collected. The bicinchoninic acid assay method was used to detect the protein concentration. 10% sodium dodecyl-sulfate polyacrylamide gel electrophoresis was prepared, and 20 µg of protein was added to each hole. After electrophoresis, the protein was transferred to polyvinylidene fluoride membranes at 300 Ma for 120 min, sealed with 5% BSA for 1 h, incubated with primary antibody at 4 ℃ overnight, washed with Tris Buffered Saline with Tween (TBST) 3 times, incubated with secondary antibody at room temperature for 1 h, washed with TBST another 3 times, and then developed with ECL developer.
Tumor xenograft assay
Experiments were performed under a project license (No. 2019QN02) granted by Animal Care and Use Committee of Shanghai Changhai Hospital, the First Affiliated Hospital of Naval Military Medical University, in compliance with eighth edition guidelines for the care and use of experimental animals (17). A protocol was prepared before the study without registration. Male nude mice (BALB/C, 6 weeks old) were purchased from Shanghai Laboratory Animal Center (SLAC, China) and housed under specific pathogen-free conditions. The mice were divided randomly into four groups (five mice per group): (I) pLVX-NONHSAT210528 group; (II) pLVX-Vector group; (III) pLKO.1- NONHSAT210528 group; (IV) pLKO.1-Vetor group. After digesting the logarithmic growth C4-2 cells with trypsin, the C4-2 cells were resuspended with serum-free medium, and the cell concentration was adjusted to 1.0×107 cells/mL. Next, 100 µL of cell suspension was injected into the back of the male nude mice. The tumor volume was measured once a week. After the sixth week of inoculation, the mice were killed by cervical dislocation. The tumor tissue was removed, weighed, and photographed. The animal experiment was done in the Laboratory Animal Centre of Naval Military Medical University.
Statistical analysis
SPSS analysis software (SPSS 22.0) was used for the statistical analysis. The results are expressed as the mean ± standard deviation. The means of 2 samples were compared by an independent sample t test, and the means of multiple samples were compared by a one-way analysis of variance. A P value <0.05 was considered statistically significant.
Results
LncRNA NONHSAT210528 was upregulated in enzalutamide-resistant C4-2 cells
Enzalutamide resistance is the reason for the failure of enzalutamide treatment. Thus, it is necessary to explore the specific molecular mechanism underlying enzalutamide resistance. We constructed an enzalutamide-resistant cell line C4-2 ENZ-R in vitro, and analyzed expression differences in lncRNA between C4-2 ENZ-R and its parent cell line C4-2 using lncRNA microarrays. The lncRNA microarray analysis showed that there were significant differences in the expression of many lncRNAs between the C4-2 ENZ-R and C4-2 cells. Notably, 924 lncRNAs were downregulated, and 694 lncRNAs were upregulated in the C4-2 ENZ-R cells compared to the C4-2 cells (see Figure 1A,1B). The real-time PCR detection showed that the expression of lncRNA NONHSAT210528 was significantly higher in the C4-2 ENZ-R cells than in the C4-2 cells (see Figure 1C).
LncRNA NONHSAT210528 knockdown suppressed the proliferation and invasion of the C4-2 and C4-2b cells
To detect the effect of lncRNA NONHSAT210528 on the function of PCa cells, we constructed a short-harpin RNA (shRNA) specific target for lncRNA NONHSAT210528. The real-time PCR detection results showed that the expression of lncRNA NONHSAT210528 was significantly more downregulated in the pLKO.1-NONHSAT210528 group than the pLKO.1-vector group in the C4-2 and C4-2b cells (see Figure 2A). The CCK-8 detection results showed that the cell viability of the C4-2 and C4-2b cells was lower in the pLKO.1-NONHSAT210528 group than the pLKO.1-vector group at 48, 72, and 96 h (see Figure 2B). The cell-cycle detection results showed that lncRNA NONHSAT210528 knockdown increased the proportion of the G1 and reduced the proportion of the G2 and S phase (see Figure 2C). The clone formation detection results showed that lncRNA NONHSAT210528 knockdown reduced the number of clones in the C4-2 and C4-2b cells (see Figure 2D). The flow cytometry detection results showed that lncRNA NONHSAT210528 knockdown had no effect on the apoptosis of the C4-2 and C4-2b cells (see Figure 2E). The cell-wound scratch assays showed that lncRNA NONHSAT210528 knockdown reduced the migration of the C4-2 and C4-2b cells (see Figure 2F). The Transwell assays showed that lncRNA NONHSAT210528 knockdown reduced the invasion of the C4-2 and C4-2b cells (see Figure 2G).
LncRNA NONHSAT210528 overexpression promoted the proliferation and invasion of the C4-2 and C4-2b cells
To detect the effect of lncRNA NONHSAT210528 on the function of PCa cells, we constructed a lentiviral vector to overexpress lncRNA NONHSAT210528. The real-time PCR detection results showed that the expression of lncRNA NONHSAT210528 was significantly more upregulated in the pLVX-NONHSAT210528 group than the pLVX-vector group in the C4-2 and C4-2b cells (see Figure 3A). The CCK-8 detection results showed that the cell viability of the C4-2 and C4-2b cells was higher in the pLVX-NONHSAT210528 group than the pLVX-vector group at 48, 72, and 96 h (see Figure 3B). The cell-cycle detection results showed that lncRNA NONHSAT210528 overexpression decreased the proportion of G1 and increased the proportion of the G2 and S phase (see Figure 3C). The clone formation detection results showed that lncRNA NONHSAT210528 overexpression increased the number of clones in the C4-2 and C4-2b cells (see Figure 3D). The flow cytometry detection results showed that lncRNA NONHSAT210528 overexpression had no effect on the apoptosis of the C4-2 and C4-2b cells (see Figure 3E). The cell-wound scratch assays showed that lncRNA NONHSAT210528 overexpression increased the migration of the C4-2 and C4-2b cells (see Figure 3F). The Transwell assays showed that lncRNA NONHSAT210528 overexpression increased the invasion of the C4-2 and C4-2b cells (see Figure 3G).
LncRNA NONHSAT210528 regulated the proliferation of C4-2 cells in vivo
To detect the effect of lncRNA NONHSAT210528 on the proliferation of the C4-2 cells in vivo, we constructed a subcutaneous ectopic tumor formation model. The detection results showed that the overexpression of lncRNA NONHSAT210528 promoted the proliferation and that lncRNA NONHSAT210528 knockdown reduced the proliferation of C4-2 cells in vivo (see Figure 4A). The pLVX- NONHSAT210528 group had a higher weight and volume than the pLVX-vector group, and the pLKO.1- NONHSAT210528 group had a lower weight and volume than the pLKO.1-vector group (see Figure 4B,4C).
LncRNA NONHSAT210528 regulated the epithelial-mesenchymal transformation (EMT)-related gene in C4-2 and C4-2b cells
EMT is a biological process in which epithelial cells are transformed into cells with a mesenchymal phenotype through specific procedures. EMT is an important biological process by which malignant tumor cells derived from epithelial cells acquire the abilities of migration and invasion. We found that lncRNA NONHSAT210528 overexpression promoted the expression of ZEB1, Snail, and Fibronection and inhibited the expression of E-cadherin (see Figure 5A-5D). Conversely, lncRNA NONHSAT210528 knockdown reduced the expression of ZEB1, Snail, and Fibronection, and promoted the expression of E-cadherin (see Figure 5A-5D).
The culture supernatant of C4-2 and C4-2b cells with overexpressed lncRNA NONHSAT210528 promoted the angiogenesis of human umbilical endothelial cells (HUVECs)
The rapid proliferation of tumor cells leads to local ischemia and hypoxia, which directly stimulate angiogenesis. Additionally, hypoxia also causes a variety of tissue cells, especially tumor cells, to secrete angiogenic factors, and promotes endothelial cell proliferation and chemotactic endothelial cell migration. The cell-wound scratch and the transwell assays showed that the culture supernatant of C4-2 and C4-2b cells with overexpressed lncRNA NONHSAT210528 promoted the migration and invasion of HUVECs, and the culture supernatant of C4-2 and C4-2b cells with down-regulated lncRNA NONHSAT210528 inhibited the migration and invasion of HUVECs (see Figure 6A-6C). The enzyme-linked immunoassays (ELISAs) showed that lncRNA NONHSAT210528 overexpression increased vascular endothelial growth factor (VEGF) expression, and lncRNA NONHSAT210528 knockdown suppressed VEGF expression (see Figure 6D).
LncRNA NONHSAT210528 regulated the function of miR-21
CeRNA is a gene expression regulation mode, which is regulated by RNA through miRNA reaction elements. RNA pull down was used to detect the combination of miRNA and lncRNA NONHSAT210528. MS2bs-NONHSAT210528 RNA pull down showed that miR-527, miR-509, miR-562, and miR-21-5p were more enriched in the MS2bs-NONHSAT210528 group than MS2BS-Rluc group (see Figure 7A). Biotin-miR-21-5p RNA pull down showed that lncRNA NONHSAT210528 was more enriched in the Biotin-miR-21-5p group than Biotin-miR-NC group (see Figure 7B). The double-luciferase reporter gene assays showed that lncRNA NONHSAT210528 combined with miR-21-5p (see Figure 7C). Next, we examined the effect of miR-21-5p on the function of the C4-2 and C4-2b cells. miR-21-5p overexpression inhibited the cell viability of the C4-2 and C4-2b cells, and miR-21-5p knockdown promoted the cell viability of the C4-2 and C4-2b cells (see Figure 7D,7E). Conversely, miR-21-5p overexpression inhibited the cell invasion of the C4-2 and C4-2b cells, and miR-21-5p knockdown promoted the cell invasion of the C4-2 and C4-2b cells (see Figure 7F,7G). However, the effect of lncRNA NONHSAT210528 on the invasion of the C4-2 and C4-2b cells was significantly reduced when the expression of miR-21-5p were inhibited (see Figure 7H,7I).
LncRNA NONHSAT210528 regulated the expression of YOD1 dependent on miR-21
Using the bioinformatics analysis software, we found that miR-21-5p targeted the 3'-untranslated region (3'-UTR) region of YOD1 mRNA. The real-time PCR results showed that miR-21-5p overexpression and knockdown did not affect the expression level of YOD1 mRNA (see Figure 8A). The double-luciferase reporter gene assay showed that the 3'-UTR region of YOD1 mRNA combined with miR-21-5p (see Figure 8B). The Western blot showed that miR-21-5p overexpression inhibited the expression of the YOD1 protein, while miR-21-5p knockdown promoted the expression of the YOD1 protein (see Figure 8C). Conversely, the overexpression of NONHSAT210528 promoted the expression of the YOD1 protein, but NONHSAT210528 did not promote the expression of YOD1 protein when miR-21-5p was knocked down (see Figure 8D).
Discussion
Docetaxel chemotherapy has been shown to increase the survival of CRPC patients to 18.9 months (18). The advent of the second-generation androgen-receptor antagonist of enzalutamide has innovated the new endocrine therapy concept of CRPC, and prolonged the median survival time of CRPC patients to 32.4 months (19). However, shortly after enzalutamide began to be widely used in clinical settings, new problems arose. About 42% of CRPC patients are not sensitive to enzalutamide treatment (20), and even if the treatment is effective, enzalutamide resistance will re-occur after 11.2 months (19). At present, the mechanism of enzalutamide resistance in PCa has not been clarified. Thus, exploring the molecular mechanism of enzalutamide resistance is very important to increase the sensitivity of enzalutamide treatment and prevent enzalutamide resistance. LncRNA is a kind of non-coding RNA with transcripts >200 nt. In recent years, developments in lncRNA research have shown that lncRNA plays an important role in tumor drug resistance (21). Thus, exploring the relationship between lncRNA and enzalutamide resistance in PCa has become a new molecular therapeutic target for PCa. In this study, we established enzalutamide-resistant C4-2 cells according to the method of previous study (16), then detecting the differential expression profiles of lncRNA between the parent cell line and enzalutamide-resistant cell line by lncRNA microarrays, to explore the molecular mechanism of lncRNA and enzalutamide resistance in PCa patients from a new perspective.
To date, most in-depth research on the related functions of lncRNA has focused on its role in cancer. Under normal physiological conditions, the expression of lncRNA is strictly regulated. Conversely, the abnormal expression of lncRNA is accompanied by the occurrence and development of many cancers. LncRNAs can not only promote tumor formation as protooncogenes, but also inhibit the proliferation and migration of tumor cells as tumor suppressor genes (22). The results of the lncRNA microarray analysis showed that the expression level of lncRNA NONHSAT210528 was significantly increased in the C4-2b-ENZR cells. The drug resistance of tumor cells to anti-cancer drugs is a main reason for the failure of chemotherapy (23,24). In both congenital and acquired drug resistance, the abnormal activation of the intracellular signal pathway is closely related to tumor drug resistance. LncRNAs can cause drug resistance by affecting the tumor cell cycle. At present, many studies have reported that lncRNAs are involved in the drug resistance of PCa (25,26). Such as, lncRNA PCAT1 was found to promote the castration resistance of PCa patients by activating the AKT and NF-kappa B signaling pathway (27). Additionally, LncRNA HORAS5 promotes taxane resistance in castration-resistant PCa via a BCL2A1-dependent mechanism (28). LncRNA PCBP1-AS1-mediated AR/AR-V7 deubiquitination enhances PCa enzalutamide resistance (29). Previous studies have reported that lncRNA can regulate the function of downstream miRNA through the ceRNA mechanism, thus regulating the expression of target genes (12,30). Using bioinformatics software analysis, dual-luciferase reporter gene, and RNA pull-down assays, it was found that NONHSAT210528 binds to miR-21-5p, and regulates the function of miR-21-5p. Subsequently, using bioinformatics, dual-luciferase reporter gene, and RNA pull-down assays, we found that miR-21-5p targets the expression of YOD1. YOD1 is a highly conserved deubiquitinase in the otubain family, which removes ubiquitin residues from polyubiquitinated proteins. Despite being highly conserved, the function of YOD1 in high-grade eukaryotes is not clear. YOD1, as a target gene of miR-4429, regulates the metastasis of ovarian cancer (31). LncRNA FIRRE promotes the progression of gallbladder cancer by mediating the expression of YOD1 through a ceRNA mechanism (32). It has been reported that YOD1 may become a biomarker for the prognostic evaluation of PCa (33). In this study, we found that YOD1 is involved in the resistance of enzalutamide, which may become a new target for the treatment of enzalutamide resistance.
Conclusions
Enzalutamide-resistant related lncRNA NONHSAT210528 appears to promote the proliferation and invasion of C4-2 and C4-2b cells by functioning as a ceRNA and regulating the miR-21-5p/YOD1 signal pathway.
Acknowledgments
Funding: This work was supported by the Changhai Hospital GCP platform (No. 2017ZX09304030) and Changhai Hospital Youth Start-Up Fund (No. 2019QNA02).
Footnote
Reporting Checklist: The authors have completed the ARRIVE reporting checklist. Available at https://tau.amegroups.com/article/view/10.21037/tau-22-99/rc
Data Sharing Statement: Available at https://tau.amegroups.com/article/view/10.21037/tau-22-99/dss
Conflicts of Interest: The author has completed the ICMJE uniform disclosure form (available at https://tau.amegroups.com/article/view/10.21037/tau-22-99/coif). The author has no conflicts of interest to declare.
Ethical Statement: The author is accountable for all aspects of the work in ensuring that questions related to the accuracy or integrity of any part of the work are appropriately investigated and resolved. Experiments were performed under a project license (No. 2019QN02) granted by Animal Care and Use Committee of Shanghai Changhai Hospital, the First Affiliated Hospital of Naval Military Medical University, in compliance with eighth edition guidelines for the care and use of experimental animals.
Open Access Statement: This is an Open Access article distributed in accordance with the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 International License (CC BY-NC-ND 4.0), which permits the non-commercial replication and distribution of the article with the strict proviso that no changes or edits are made and the original work is properly cited (including links to both the formal publication through the relevant DOI and the license). See: https://creativecommons.org/licenses/by-nc-nd/4.0/.
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